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Welcome to the spectrum_similarity wiki!

This wiki consists of the following pages:

1.1.GUI: how to run a probabilistic based scoring function to compare two given spectra data sets

[1.2.Setting parameters of the GUI for the comparison of a cumulative binomial derived scoring function] (https://github.com/compomics/spectrum_similarity/wiki/1.2.Setting-parameters-of-the-GUI-application)

2.1.Stand-alone: how to run a probabilistic based scoring function to compare two given spectra data sets

2.2.Setting parameters for the stand alone application (MS2Similarity.properties)

3.GUI: A pairwise spectrum view

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1.1.GUI: how to run a probabilistic based scoring function to compare two given spectra data sets 1.1.GUI: how to run a probabilistic based scoring function to compare two given spectra data sets 1.2.Setting parameters of the GUI application 2.1.Stand alone: how to run a probabilistic based scoring function to compare two given spectra data sets 2.1.Stand alone: how to run a probabilistic based scoring function to compare two given spectra data sets 2.2.Setting parameters of the stand alone application (MS2Similarity.properties) 3.GUI: a pairwise spectrum view 3.GUI: a pairwise spectrum view Home
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DeepLC ThermoRawFileParser ThermoRawFileParserGUI colims compomics-utilities dbtoolkit denovogui fragmentation-analyzer iceLogo jsparklines jtraml mappi-dat mascotdatfile meta-proteome-analyzer moff ms-lims ms2pip_c ms2rescore omssa-parser pepshell peptide-shaker pladipus pride-asa-pipeline reporter search-all-assess-subset searchgui spectrum_similarity thermo-msf-parser xilmass xtandem-parser